PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK36740.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family WRKY
Protein Properties Length: 500aa    MW: 55341 Da    PI: 8.1068
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK36740.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.17.6e-33177234260
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers  +++++ei+Y+g+Hnh+k
  KFK36740.1 177 EDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSL-EGQITEIVYKGSHNHPK 234
                 7****************************************.***************85 PP

2WRKY105.13.8e-33347405159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d ++v++tYeg+Hnh+
  KFK36740.1 347 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTIGCPVRKHVERASHDMRAVITTYEGKHNHD 405
                 59********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-27170235IPR003657WRKY domain
SuperFamilySSF1182902.75E-24176235IPR003657WRKY domain
SMARTSM007741.0E-33176234IPR003657WRKY domain
PROSITE profilePS5081122.905177235IPR003657WRKY domain
PfamPF031067.4E-25177233IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.2E-37332407IPR003657WRKY domain
SuperFamilySSF1182903.01E-29339407IPR003657WRKY domain
PROSITE profilePS5081138.434342407IPR003657WRKY domain
SMARTSM007741.8E-38347406IPR003657WRKY domain
PfamPF031061.9E-25348405IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009753Biological Processresponse to jasmonic acid
GO:0009788Biological Processnegative regulation of abscisic acid-activated signaling pathway
GO:0009938Biological Processnegative regulation of gibberellic acid mediated signaling pathway
GO:0010120Biological Processcamalexin biosynthetic process
GO:0010200Biological Processresponse to chitin
GO:0010508Biological Processpositive regulation of autophagy
GO:0042742Biological Processdefense response to bacterium
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0070370Biological Processcellular heat acclimation
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MAASSFLTMD NSRTRQDMTS SGSANWSQGR TTTSLEGLEI PKFRSFAPSS ISISPSLVSP  60
STCFSPSLFL DSPAFVSSSA NILASPTTGA LITNESNQKS INEEEKKKNN NNNFNFFDFS  120
FQTQPSLVSA PTTTTTTTNS SIFQEQKKNE SNQWNQTETR VNNQAISYNG REQRKGEDGY  180
NWRKYGQKQV KGSENPRSYY KCTFPSCPTK KKVERSLEGQ ITEIVYKGSH NHPKPQSTRR  240
SSSSSSYQSA VFNAGYDQSD QQNSNNNNSF HQSDSFAVED NTTSGSVGDD EFERSSVVSR  300
EEEDCGSEPE AKRWKGENET NGGNGNASKT TREPRIVVQT TSDIDILDDG YRWRKYGQKV  360
VKGNPNPRSY YKCTTIGCPV RKHVERASHD MRAVITTYEG KHNHDVPAAR GSGYAINRPP  420
QDSAAVPIRP AAISGHSNYT TSSQAPYTLQ MLQNNTNSGP FGYAMNNNNV QSQQNFGGGG  480
FSRAKEEPNE ETSFFDSFLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A7e-38177408878Probable WRKY transcription factor 4
1wj2_A7e-38177408878Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00299DAPTransfer from AT2G38470Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3526830.0AK352683.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-03-H12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006293466.10.0hypothetical protein CARUB_v10023006mg
SwissprotQ8S8P50.0WRK33_ARATH; Probable WRKY transcription factor 33
TrEMBLA0A087H3N80.0A0A087H3N8_ARAAL; Uncharacterized protein
STRINGAT2G38470.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM45832755
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.10.0WRKY DNA-binding protein 33